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When you’re finished working for the day, it’s important to remember to enter exit twice, once to exit the container and once to log out of the Vagrant virtual machine: Normally you will be spending your time working in either the Singularity container or the Charliecloud container. So, if you work within the container, you will be in an Ubuntu environment regardless of which OS your vagrant VM is running. However, you shouldn’t need to be too concerned about this because you’ll be working mostly in either the Singularity container or the Charliecloud container which both run Ubuntu. You can even try both in the same virtual machine and see which one you prefer.ĭepending on which Vagrantfile you use, your VM may run either the Ubuntu or the CentOS operating system. But, if you use Vagrant this should not be a problem because you should have root privileges in your Vagrant VM. The main advantage to using Charliecloud is that you do not need root privileges to run it.
Both the Singularity container and the Charliecloud container are built from the same Docker image file so they contain identical software. From here you can pull the JEDI container of your choice,Ĭlick here to proceed with JEDI Singularity ContainerĬlick here to proceed with the JEDI Charliecloud Container Now you are in a linux environment (CentoOS 7). Once you have done this, you can proceed as follows: You’ll need a relatively recent version in order to use the cask extension.
#Vagrant destroy install#
However, we recommend that you install with Homebrew as described below to give you more flexibility in managing both vagrant and virtualbox.īefore you begin you should install or update Homebrew. Installing and Configuring Vagrant ¶ A: Install Vagrant and VirtualBox ¶Īs with Windows, you can install Vagrant on a Mac by downloading a pre-compiled binary package from the Vagrant Dowload Page.
#Vagrant destroy how to#
After installing Vagrant, you may wish to return to this document for tips on how to configure it for JEDI (skipping Step A of the next section). We refer Windows users to the Vagrant download page where you can download a binary implementation for windows and install it using the Windows package manager.
#Vagrant destroy mac os#
Though you can use Vagrant for both platforms, we focus here on Mac OS X. You do need Vagrant and VirtualBox (or something equivalent) if you wish to run JEDI from a Mac or Windows machine. By working machine we mean whatever machine you plan to compile and run JEDI on.
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We’ll then populate that Linux VM with specific JEDI software tools (compilers, ecbuild, etc.) using Singularity or Charliecloud.įrom this brief introduction, it is clear that you do not need to worry about Vagrant or VirtualBox if your working machine (whether it is a workstation, laptop, or HPC system) is already running Linux and/or is already running Singularity. In particular, we will use Vagrant and VirtualBox to create an Ubuntu virtual machine on your Mac workstation or laptop. Vagrant is essentially a tool will allow you to build, configure, and manage a VirtualBox operating system. Though we will sometimes refer to Vagrant as the virtual machine provider, the actual Linux operating system is ultimately provided by Oracle’s VirtualBox software package. This can all be achieved using an application called Vagrant, which is developed and distributed by a company called Hashicorp. Once you have a linux VM up and running, you will be able to install Singularity or Charliecloud and triumphantly enter the corresponding JEDI Container.
This is commonly called a virtual machine (VM). So, if you’re using a Mac or Windows computer, you will want to set up a local, self-contained Linux environment within your broader operating system. We will often focus on Ubuntu for illustration purposes but if you prefer other varieties of Linux, these are also available from the VIrtualbox provider that we describe below.
In order to set up the JEDI environment with Singularity or Charliecloud, you’ll need to first set up a Linux operating system.
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